Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smc1aQ9CU62 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gm26286-201ENSMUST00000104166 134 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Rprl1-201ENSMUST00000158050 327 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gm45398-201ENSMUST00000210561 165 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smc1aQ9CU62 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smc1aQ9CU62 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gm15573-201ENSMUST00000119487 540 ntBASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gm28686-201ENSMUST00000187404 609 ntBASIC12.77□□□□□ -0.37
Smc1aQ9CU62 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gm18711-201ENSMUST00000199341 750 ntBASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gm19287-201ENSMUST00000203190 358 ntBASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gm10752-201ENSMUST00000218348 729 ntBASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.77□□□□□ -0.37
Smc1aQ9CU62 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smc1aQ9CU62 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smc1aQ9CU62 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smc1aQ9CU62 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smc1aQ9CU62 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smc1aQ9CU62 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smc1aQ9CU62 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.76□□□□□ -0.37
Smc1aQ9CU62 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smc1aQ9CU62 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Smc1aQ9CU62 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms