Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lsm7Q9CQQ8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Gm13937-201ENSMUST00000121000 988 ntBASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Gm21778-201ENSMUST00000178779 471 ntBASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Gm10752-201ENSMUST00000218348 729 ntBASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lsm7Q9CQQ8 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm25063-201ENSMUST00000104666 94 ntBASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm15617-201ENSMUST00000118973 771 ntBASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm13117-201ENSMUST00000120894 691 ntBASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm15744-201ENSMUST00000161734 213 ntBASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm43163-201ENSMUST00000196571 442 ntBASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm9139-201ENSMUST00000218817 700 ntBASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lsm7Q9CQQ8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms