Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm8111-201ENSMUST00000117659 987 ntBASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm13204-201ENSMUST00000120110 821 ntBASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm14165-201ENSMUST00000121456 952 ntBASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm22885-201ENSMUST00000157410 107 ntBASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm23612-201ENSMUST00000103823 110 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm24279-201ENSMUST00000104236 131 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm6158-201ENSMUST00000109467 904 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm13039-201ENSMUST00000118638 794 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm11993-201ENSMUST00000121861 820 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm23576-201ENSMUST00000179918 110 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm43249-201ENSMUST00000200464 458 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm7525-201ENSMUST00000219425 454 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx6-1Q99MA9 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms