Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gm21811-201ENSMUST00000096485 930 ntBASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Btrc-209ENSMUST00000224478 2194 ntBASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cstf3Q99LI7 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Gm12463-201ENSMUST00000118271 849 ntBASIC11□□□□□ -0.65
Cstf3Q99LI7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11□□□□□ -0.65
Cstf3Q99LI7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11□□□□□ -0.65
Cstf3Q99LI7 Gm6439-201ENSMUST00000199849 862 ntBASIC11□□□□□ -0.65
Cstf3Q99LI7 Gm18212-201ENSMUST00000211678 889 ntBASIC11□□□□□ -0.65
Cstf3Q99LI7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11□□□□□ -0.65
Cstf3Q99LI7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11□□□□□ -0.65
Cstf3Q99LI7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cstf3Q99LI7 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Mir877-201ENSMUST00000104738 85 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm13916-201ENSMUST00000117368 628 ntBASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Cstf3Q99LI7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms