Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.21□□□□□ -0.29
Smc1bQ920F6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Gm8894-201ENSMUST00000074642 666 ntBASIC13.21□□□□□ -0.29
Smc1bQ920F6 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smc1bQ920F6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smc1bQ920F6 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smc1bQ920F6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smc1bQ920F6 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smc1bQ920F6 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.21□□□□□ -0.3
Smc1bQ920F6 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Smc1bQ920F6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm5419-201ENSMUST00000119301 527 ntBASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm12030-201ENSMUST00000121917 223 ntBASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm8451-201ENSMUST00000170338 447 ntBASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.2□□□□□ -0.3
Smc1bQ920F6 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.2□□□□□ -0.3
Smc1bQ920F6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm7536-201ENSMUST00000077389 444 ntBASIC13.2□□□□□ -0.3
Smc1bQ920F6 Gm5453-201ENSMUST00000080866 447 ntBASIC13.2□□□□□ -0.3
Smc1bQ920F6 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1bQ920F6 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.19□□□□□ -0.3
Smc1bQ920F6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Gm14274-201ENSMUST00000117182 615 ntBASIC13.19□□□□□ -0.3
Smc1bQ920F6 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Gm3150-201ENSMUST00000166418 204 ntBASIC13.19□□□□□ -0.3
Smc1bQ920F6 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Gm2553-201ENSMUST00000215986 605 ntBASIC13.19□□□□□ -0.3
Smc1bQ920F6 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smc1bQ920F6 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms