Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
E4f1Q8CCE9 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm11783-201ENSMUST00000119549 885 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm7150-201ENSMUST00000122032 981 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm8531-201ENSMUST00000188319 893 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm6450-201ENSMUST00000200896 574 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm44158-201ENSMUST00000203881 505 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm45594-201ENSMUST00000211717 241 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm19009-201ENSMUST00000223072 823 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
E4f1Q8CCE9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
E4f1Q8CCE9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
E4f1Q8CCE9 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
E4f1Q8CCE9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Gm24398-201ENSMUST00000157870 109 ntBASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Gm38151-201ENSMUST00000195085 289 ntBASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Gm6108-201ENSMUST00000208365 367 ntBASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Erich3-203ENSMUST00000189969 3460 ntBASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Cog3-203ENSMUST00000227473 4197 ntBASIC13.39□□□□□ -0.27
E4f1Q8CCE9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms