Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 AC158982.1-201ENSMUST00000228377 901 ntBASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gm12164-201ENSMUST00000121695 551 ntBASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gm2546-201ENSMUST00000182630 991 ntBASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 AC122459.1-201ENSMUST00000228373 885 ntBASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smco3Q8BQM7 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Smco3Q8BQM7 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.34□□□□□ -0.92
Smco3Q8BQM7 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.33□□□□□ -0.92
Smco3Q8BQM7 Gm25043-201ENSMUST00000158604 212 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms