Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm38349-201ENSMUST00000195732 462 ntBASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm3198-201ENSMUST00000208725 1026 ntBASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 AA474408-201ENSMUST00000098110 3339 ntBASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm13758-201ENSMUST00000118699 743 ntBASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm11295-201ENSMUST00000121379 803 ntBASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm25735-201ENSMUST00000175164 215 ntBASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm8707-201ENSMUST00000183325 980 ntBASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smg1Q8BKX6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Ighv13-1-201ENSMUST00000103480 294 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm6038-201ENSMUST00000154310 948 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Mir6930-201ENSMUST00000183859 68 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm20281-201ENSMUST00000188225 267 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Ighv1-8-201ENSMUST00000192236 293 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 AU015228-201ENSMUST00000121103 1320 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm7805-201ENSMUST00000154348 448 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm16301-201ENSMUST00000161959 295 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm9578-201ENSMUST00000182354 753 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 AC155293.1-201ENSMUST00000219793 1026 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 AC123698.1-201ENSMUST00000227090 402 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm25288-201ENSMUST00000122800 265 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm18030-201ENSMUST00000222163 731 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Gm25483-201ENSMUST00000083224 227 ntBASIC9.32□□□□□ -0.92
Smg1Q8BKX6 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms