Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm12439-201ENSMUST00000117162 365 ntBASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm17825-201ENSMUST00000206836 794 ntBASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.22□□□□□ -0.61
Pcdh19Q80TF3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm14892-201ENSMUST00000117636 267 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm13422-201ENSMUST00000118834 504 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Mir1901-201ENSMUST00000122616 78 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Mir1956-201ENSMUST00000157748 65 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm23153-201ENSMUST00000175323 313 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Mir7051-201ENSMUST00000184167 73 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm37720-201ENSMUST00000195497 1241 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Gm45856-201ENSMUST00000212752 416 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms