Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm29155-201ENSMUST00000185910 269 ntBASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm8197-202ENSMUST00000193422 934 ntBASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Mt1-202ENSMUST00000211807 1085 ntBASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ubfd1Q78JW9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm12218-201ENSMUST00000117666 399 ntBASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm29410-201ENSMUST00000188383 694 ntBASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm37028-201ENSMUST00000194276 107 ntBASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm43380-201ENSMUST00000200421 220 ntBASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm30671-201ENSMUST00000214898 318 ntBASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ubfd1Q78JW9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ubfd1Q78JW9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms