Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Gm27440-201ENSMUST00000184785 107 ntBASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Gm8384-201ENSMUST00000190905 704 ntBASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Gm6478-201ENSMUST00000099450 742 ntBASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ddx55Q6ZPL9 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm23769-201ENSMUST00000104441 121 ntBASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm7238-201ENSMUST00000206467 973 ntBASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Lect2-202ENSMUST00000225183 823 ntBASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ddx55Q6ZPL9 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm13827-201ENSMUST00000148801 372 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm18733-202ENSMUST00000174447 401 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm7627-201ENSMUST00000183205 999 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm43966-201ENSMUST00000203301 612 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ddx55Q6ZPL9 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms