Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.19□□□□□ -0.3
Nup98Q6PFD9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Gm8451-201ENSMUST00000170338 447 ntBASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Gm43460-201ENSMUST00000202491 1057 ntBASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Gm5340-201ENSMUST00000203733 880 ntBASIC13.19□□□□□ -0.3
Nup98Q6PFD9 AC154407.1-201ENSMUST00000226777 526 ntBASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Gm5453-201ENSMUST00000080866 447 ntBASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nup98Q6PFD9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gm12418-201ENSMUST00000118116 942 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gm5244-201ENSMUST00000164001 339 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gm37452-201ENSMUST00000194416 1160 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gm13094-201ENSMUST00000117930 409 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gm16288-201ENSMUST00000137940 367 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gm18001-201ENSMUST00000212023 688 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 AC154806.7-201ENSMUST00000227998 202 ntBASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nup98Q6PFD9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup98Q6PFD9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms