Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rai1Q61818 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Gm14592-201ENSMUST00000117201 560 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rai1Q61818 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rai1Q61818 Gm6677-201ENSMUST00000195100 441 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Rai1Q61818 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.87□□□□□ -0.67
Rai1Q61818 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rai1Q61818 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rai1Q61818 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rai1Q61818 Gm23769-201ENSMUST00000104441 121 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rai1Q61818 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Gm13171-201ENSMUST00000117233 391 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 Gm15707-201ENSMUST00000118804 996 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 Gm8019-201ENSMUST00000119317 587 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Gm18001-201ENSMUST00000212023 688 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Rai1Q61818 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC10.87□□□□□ -0.67
Rai1Q61818 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.87□□□□□ -0.67
Rai1Q61818 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rai1Q61818 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rai1Q61818 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rai1Q61818 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rai1Q61818 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rai1Q61818 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.86□□□□□ -0.67
Rai1Q61818 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.86□□□□□ -0.67
Rai1Q61818 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm11952-201ENSMUST00000121172 821 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm25872-201ENSMUST00000177784 100 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 Gm10020-201ENSMUST00000081993 612 ntBASIC10.86□□□□□ -0.67
Rai1Q61818 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Rai1Q61818 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Rai1Q61818 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rai1Q61818 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rai1Q61818 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Rai1Q61818 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Rai1Q61818 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rai1Q61818 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.86□□□□□ -0.67
Rai1Q61818 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rai1Q61818 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms