Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Foxc1Q61572 Gm12584-201ENSMUST00000117109 1105 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC8.8□□□□□ -1
Foxc1Q61572 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm26361-201ENSMUST00000158868 186 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Gm17219-201ENSMUST00000168439 593 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Foxc1Q61572 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC8.8□□□□□ -1
Foxc1Q61572 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC8.8□□□□□ -1
Foxc1Q61572 Gm5268-201ENSMUST00000189212 940 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Gm36997-201ENSMUST00000195090 707 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Gm38317-201ENSMUST00000195564 343 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Gm44651-201ENSMUST00000207343 372 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 AC153974.2-201ENSMUST00000218577 1025 ntBASIC8.8□□□□□ -1
Foxc1Q61572 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm40598-201ENSMUST00000222953 547 ntBASIC8.8□□□□□ -1
Foxc1Q61572 AC166344.1-202ENSMUST00000224139 234 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC8.8□□□□□ -1
Foxc1Q61572 AC112945.1-201ENSMUST00000226413 514 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Foxc1Q61572 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC8.8□□□□□ -1
Foxc1Q61572 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC8.8□□□□□ -1
Foxc1Q61572 Tmigd1-201ENSMUST00000072633 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm28323-201ENSMUST00000186817 2499 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Foxc1Q61572 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Gm15991-202ENSMUST00000212123 3565 ntBASIC8.79□□□□□ -1
Foxc1Q61572 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC8.79□□□□□ -1
Foxc1Q61572 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Foxc1Q61572 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
Foxc1Q61572 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Foxc1Q61572 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Foxc1Q61572 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC8.79□□□□□ -1
Foxc1Q61572 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Adra1a-206ENSMUST00000225182 2337 ntBASIC8.79□□□□□ -1
Foxc1Q61572 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC8.79□□□□□ -1
Foxc1Q61572 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
Foxc1Q61572 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC8.79□□□□□ -1
Foxc1Q61572 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC8.79□□□□□ -1
Foxc1Q61572 Gm11439-201ENSMUST00000118598 409 ntBASIC8.79□□□□□ -1
Foxc1Q61572 Gm12383-201ENSMUST00000120628 760 ntBASIC8.79□□□□□ -1
Foxc1Q61572 Gm11446-201ENSMUST00000121319 866 ntBASIC8.79□□□□□ -1
Foxc1Q61572 Gm14713-201ENSMUST00000122362 686 ntBASIC8.79□□□□□ -1
Foxc1Q61572 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC8.79□□□□□ -1
Foxc1Q61572 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC8.79□□□□□ -1
Foxc1Q61572 Gm24845-201ENSMUST00000158034 109 ntBASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms