Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Btrc-209ENSMUST00000224478 2194 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm7851-201ENSMUST00000117574 323 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm8731-201ENSMUST00000118088 412 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm29499-201ENSMUST00000189151 486 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm28329-201ENSMUST00000191208 689 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm29171-201ENSMUST00000191397 486 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm18056-201ENSMUST00000207670 568 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm18061-201ENSMUST00000208350 562 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm18063-201ENSMUST00000208529 568 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm18052-201ENSMUST00000208750 559 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm5369-201ENSMUST00000217499 588 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm6722-201ENSMUST00000221586 390 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Ntng1-201ENSMUST00000051253 327 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Trav5d-4Q5R1F6 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Gm13809-201ENSMUST00000117921 597 ntBASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Gm12217-201ENSMUST00000118858 696 ntBASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Gm3150-201ENSMUST00000166418 204 ntBASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Mir6927-201ENSMUST00000184494 71 ntBASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Gm37246-201ENSMUST00000192665 835 ntBASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms