Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav3-3Q5R1C3 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav3-3Q5R1C3 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav3-3Q5R1C3 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm24644-201ENSMUST00000157114 139 ntBASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm6007-201ENSMUST00000208170 823 ntBASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 AC159006.1-201ENSMUST00000226396 258 ntBASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 CT025535.1-201ENSMUST00000227172 491 ntBASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 AC165080.1-201ENSMUST00000215257 3123 ntBASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm44103-201ENSMUST00000204364 3662 ntBASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Src-205ENSMUST00000109533 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm9271-201ENSMUST00000185988 2580 ntBASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm38357-201ENSMUST00000195382 2464 ntBASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC8.52□□□□□ -1.05
Trav3-3Q5R1C3 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm44745-201ENSMUST00000206563 2723 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm13369-201ENSMUST00000119442 987 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm23984-201ENSMUST00000157139 203 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm22331-201ENSMUST00000158066 136 ntBASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC8.51□□□□□ -1.05
Trav3-3Q5R1C3 Gm27847-201ENSMUST00000183711 107 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms