Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC14.74□□□□□ -0.05
Sf3b2Q3UJB0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.74□□□□□ -0.05
Sf3b2Q3UJB0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Sf3b2Q3UJB0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3b2Q3UJB0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm12947-201ENSMUST00000116114 420 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm14006-201ENSMUST00000122132 981 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm25288-201ENSMUST00000122800 265 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm17782-201ENSMUST00000174345 880 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm6216-201ENSMUST00000182390 687 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Mir7088-201ENSMUST00000184227 86 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm9644-201ENSMUST00000212828 1183 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC14.73□□□□□ -0.05
Sf3b2Q3UJB0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Gm5159-201ENSMUST00000212733 1652 ntBASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Gm12028-201ENSMUST00000118065 436 ntBASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Gm11952-201ENSMUST00000121172 821 ntBASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sf3b2Q3UJB0 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Gm16441-201ENSMUST00000138176 924 ntBASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Gm43117-201ENSMUST00000198531 379 ntBASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 AC116797.2-202ENSMUST00000223587 1017 ntBASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Gm5278-201ENSMUST00000055957 552 ntBASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sf3b2Q3UJB0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Sf3b2Q3UJB0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sf3b2Q3UJB0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sf3b2Q3UJB0 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sf3b2Q3UJB0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sf3b2Q3UJB0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.71□□□□□ -0.06
Sf3b2Q3UJB0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms