Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.3□□□□□ -0.92
Trim63Q38HM4 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Chad-201ENSMUST00000040418 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.3□□□□□ -0.92
Trim63Q38HM4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm28693-202ENSMUST00000190758 331 ntBASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm43179-201ENSMUST00000198797 275 ntBASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm8099-201ENSMUST00000200510 742 ntBASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm44069-201ENSMUST00000204898 506 ntBASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.3□□□□□ -0.92
Trim63Q38HM4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim63Q38HM4 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.29□□□□□ -0.92
Trim63Q38HM4 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.29□□□□□ -0.92
Trim63Q38HM4 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 AW822252-206ENSMUST00000208904 237 ntBASIC9.29□□□□□ -0.92
Trim63Q38HM4 Gm45683-201ENSMUST00000210825 1247 ntBASIC9.29□□□□□ -0.92
Trim63Q38HM4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.29□□□□□ -0.92
Trim63Q38HM4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.29□□□□□ -0.92
Trim63Q38HM4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.29□□□□□ -0.92
Trim63Q38HM4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim63Q38HM4 AC165260.6-205ENSMUST00000224190 9762 ntBASIC9.29□□□□□ -0.92
Trim63Q38HM4 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms