Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.57□□□□□ -0.56
Ebf1Q07802 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm14807-201ENSMUST00000116640 983 ntBASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm12274-201ENSMUST00000120062 385 ntBASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm12783-201ENSMUST00000121425 397 ntBASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm42816-201ENSMUST00000198433 325 ntBASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm42599-201ENSMUST00000201308 469 ntBASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ebf1Q07802 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ebf1Q07802 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 BC043934-202ENSMUST00000185694 2356 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ebf1Q07802 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm14441-201ENSMUST00000121960 540 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm7741-201ENSMUST00000181445 989 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm28196-201ENSMUST00000187719 640 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm37826-201ENSMUST00000195329 322 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm5982-201ENSMUST00000196234 512 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm7902-201ENSMUST00000198842 947 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Gm18463-201ENSMUST00000207258 474 ntBASIC11.56□□□□□ -0.56
Ebf1Q07802 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ebf1Q07802 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Ebf1Q07802 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms