Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 n-R5s14-201ENSMUST00000122688 107 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Cdx4Q07424 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 Gm10109-202ENSMUST00000206890 1211 ntBASIC8.83□□□□□ -1
Cdx4Q07424 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC8.83□□□□□ -1
Cdx4Q07424 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
Cdx4Q07424 Gm45118-201ENSMUST00000208928 825 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Gm45909-201ENSMUST00000212413 1031 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 AC125486.1-201ENSMUST00000218701 320 ntBASIC8.83□□□□□ -1
Cdx4Q07424 AC122408.1-201ENSMUST00000218949 218 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC8.83□□□□□ -1
Cdx4Q07424 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC8.83□□□□□ -1
Cdx4Q07424 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 AC093022.4-203ENSMUST00000228523 2657 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 AC167022.1-201ENSMUST00000218647 1458 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Cdx4Q07424 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Gm38194-201ENSMUST00000194529 2211 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
Cdx4Q07424 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Gm45496-201ENSMUST00000209918 2917 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC8.82□□□□□ -1
Cdx4Q07424 Gm7851-201ENSMUST00000117574 323 ntBASIC8.82□□□□□ -1
Cdx4Q07424 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Gm14441-201ENSMUST00000121960 540 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Gm11434-201ENSMUST00000122379 629 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC8.82□□□□□ -1
Cdx4Q07424 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Gm24514-201ENSMUST00000174961 285 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Gm19353-201ENSMUST00000184561 445 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC8.82□□□□□ -1
Cdx4Q07424 Gm36987-201ENSMUST00000194704 2979 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC8.82□□□□□ -1
Cdx4Q07424 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC8.82□□□□□ -1
Cdx4Q07424 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 AC173482.6-201ENSMUST00000225889 1741 ntBASIC8.82□□□□□ -1
Cdx4Q07424 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms