Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm13120-201ENSMUST00000117343 1446 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm13104-201ENSMUST00000119651 1446 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm12254-201ENSMUST00000134617 471 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Mir6396-201ENSMUST00000183603 111 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm8960-201ENSMUST00000219787 788 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.07□□□□□ -0.16
Cacna1sQ02789 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm5071-201ENSMUST00000104922 1035 ntBASIC14.07□□□□□ -0.16
Cacna1sQ02789 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm20474-201ENSMUST00000180089 596 ntBASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm38038-201ENSMUST00000193803 259 ntBASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm5507-201ENSMUST00000091897 1008 ntBASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.07□□□□□ -0.16
Cacna1sQ02789 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1sQ02789 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm14153-201ENSMUST00000119923 1139 ntBASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm21963-201ENSMUST00000179519 330 ntBASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm2328-201ENSMUST00000193525 535 ntBASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm4866-201ENSMUST00000197408 589 ntBASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm2716-201ENSMUST00000212350 643 ntBASIC14.06□□□□□ -0.16
Cacna1sQ02789 AC163646.3-201ENSMUST00000228879 772 ntBASIC14.06□□□□□ -0.16
Cacna1sQ02789 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm25483-201ENSMUST00000083224 227 ntBASIC14.06□□□□□ -0.16
Cacna1sQ02789 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1sQ02789 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms