Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm16071-201ENSMUST00000119589 793 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm18367-201ENSMUST00000176139 600 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm17826-201ENSMUST00000189720 798 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm37458-201ENSMUST00000194055 410 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 Olfr584-201ENSMUST00000098210 964 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.82□□□□□ -0.68
Nkx3-2P97503 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx3-2P97503 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.81□□□□□ -0.68
Nkx3-2P97503 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.81□□□□□ -0.68
Nkx3-2P97503 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.81□□□□□ -0.68
Nkx3-2P97503 Mir1901-201ENSMUST00000122616 78 ntBASIC10.81□□□□□ -0.68
Nkx3-2P97503 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx3-2P97503 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.8□□□□□ -0.68
Nkx3-2P97503 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Gm12419-201ENSMUST00000116649 636 ntBASIC10.8□□□□□ -0.68
Nkx3-2P97503 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.8□□□□□ -0.68
Nkx3-2P97503 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx3-2P97503 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms