Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.19□□□□□ -0.62
Shox2P70390 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Gm37003-201ENSMUST00000194702 2827 ntBASIC11.19□□□□□ -0.62
Shox2P70390 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.19□□□□□ -0.62
Shox2P70390 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.19□□□□□ -0.62
Shox2P70390 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.19□□□□□ -0.62
Shox2P70390 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Shox2P70390 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC11.19□□□□□ -0.62
Shox2P70390 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Shox2P70390 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.19□□□□□ -0.62
Shox2P70390 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Shox2P70390 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.19□□□□□ -0.62
Shox2P70390 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Shox2P70390 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.19□□□□□ -0.62
Shox2P70390 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.19□□□□□ -0.62
Shox2P70390 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
Shox2P70390 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.19□□□□□ -0.62
Shox2P70390 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.19□□□□□ -0.62
Shox2P70390 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.19□□□□□ -0.62
Shox2P70390 Gm31941-201ENSMUST00000209689 350 ntBASIC11.19□□□□□ -0.62
Shox2P70390 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Shox2P70390 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.19□□□□□ -0.62
Shox2P70390 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.19□□□□□ -0.62
Shox2P70390 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.19□□□□□ -0.62
Shox2P70390 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Shox2P70390 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Shox2P70390 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Shox2P70390 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Shox2P70390 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shox2P70390 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.18□□□□□ -0.62
Shox2P70390 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 AC165148.1-201ENSMUST00000224795 2372 ntBASIC11.18□□□□□ -0.62
Shox2P70390 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Shox2P70390 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Shox2P70390 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.18□□□□□ -0.62
Shox2P70390 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Shox2P70390 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 AC156802.2-203ENSMUST00000226032 1906 ntBASIC11.18□□□□□ -0.62
Shox2P70390 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Gm7150-201ENSMUST00000122032 981 ntBASIC11.18□□□□□ -0.62
Shox2P70390 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.18□□□□□ -0.62
Shox2P70390 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.18□□□□□ -0.62
Shox2P70390 Gm20495-201ENSMUST00000173902 235 ntBASIC11.18□□□□□ -0.62
Shox2P70390 Gm2546-201ENSMUST00000182630 991 ntBASIC11.18□□□□□ -0.62
Shox2P70390 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.18□□□□□ -0.62
Shox2P70390 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.18□□□□□ -0.62
Shox2P70390 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.18□□□□□ -0.62
Shox2P70390 Gm27847-201ENSMUST00000183711 107 ntBASIC11.18□□□□□ -0.62
Shox2P70390 Gm27375-201ENSMUST00000183799 107 ntBASIC11.18□□□□□ -0.62
Shox2P70390 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.18□□□□□ -0.62
Shox2P70390 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.18□□□□□ -0.62
Shox2P70390 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Gm6091-201ENSMUST00000098307 165 ntBASIC11.18□□□□□ -0.62
Shox2P70390 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.18□□□□□ -0.62
Shox2P70390 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.18□□□□□ -0.62
Shox2P70390 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Shox2P70390 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shox2P70390 Spata33-207ENSMUST00000212760 4074 ntBASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms