Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC9.18□□□□□ -0.94
Lmo4P61969 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.18□□□□□ -0.94
Lmo4P61969 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Gm26989-201ENSMUST00000182608 749 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Gm26976-201ENSMUST00000182929 908 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC9.18□□□□□ -0.94
Lmo4P61969 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.18□□□□□ -0.94
Lmo4P61969 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC9.18□□□□□ -0.94
Lmo4P61969 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Gm2594-201ENSMUST00000214774 742 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Btrc-209ENSMUST00000224478 2194 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 AC154176.1-201ENSMUST00000225897 220 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Gm26670-202ENSMUST00000226862 340 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Lmo4P61969 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Lmo4P61969 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.18□□□□□ -0.94
Lmo4P61969 Erich3-203ENSMUST00000189969 3460 ntBASIC9.18□□□□□ -0.94
Lmo4P61969 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Lmo4P61969 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.17□□□□□ -0.94
Lmo4P61969 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.17□□□□□ -0.94
Lmo4P61969 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Lmo4P61969 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.17□□□□□ -0.94
Lmo4P61969 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm25562-201ENSMUST00000104608 133 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 Gm6158-201ENSMUST00000109467 904 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm12663-201ENSMUST00000118481 958 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC9.17□□□□□ -0.94
Lmo4P61969 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.17□□□□□ -0.94
Lmo4P61969 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.17□□□□□ -0.94
Lmo4P61969 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Lmo4P61969 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 Capsl-202ENSMUST00000226688 739 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 CT573086.4-201ENSMUST00000226729 342 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 Gm8181-201ENSMUST00000062242 669 ntBASIC9.17□□□□□ -0.94
Lmo4P61969 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Lmo4P61969 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Lmo4P61969 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Lmo4P61969 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Lmo4P61969 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Lmo4P61969 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms