Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.66□□□□□ -0.38
Tpm1P58771 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Gm11793-201ENSMUST00000120433 981 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm26047-201ENSMUST00000157308 113 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm28937-201ENSMUST00000185413 695 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm29400-201ENSMUST00000187208 695 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm28662-201ENSMUST00000188446 695 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm28251-201ENSMUST00000188835 695 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm37318-201ENSMUST00000194325 695 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm38017-201ENSMUST00000194768 695 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm37287-201ENSMUST00000195449 695 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm37793-201ENSMUST00000195548 695 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm26047-202ENSMUST00000198840 115 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Gm45880-201ENSMUST00000213041 853 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Gm30285-201ENSMUST00000214614 422 ntBASIC12.66□□□□□ -0.38
Tpm1P58771 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tpm1P58771 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.66□□□□□ -0.38
Tpm1P58771 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tpm1P58771 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.66□□□□□ -0.38
Tpm1P58771 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tpm1P58771 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.65□□□□□ -0.38
Tpm1P58771 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Tpm1P58771 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tpm1P58771 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.65□□□□□ -0.38
Tpm1P58771 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Gm12463-201ENSMUST00000118271 849 ntBASIC12.65□□□□□ -0.38
Tpm1P58771 Gm11424-201ENSMUST00000121929 829 ntBASIC12.65□□□□□ -0.38
Tpm1P58771 Gm13786-201ENSMUST00000122371 333 ntBASIC12.65□□□□□ -0.38
Tpm1P58771 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Gm3329-201ENSMUST00000159873 556 ntBASIC12.65□□□□□ -0.38
Tpm1P58771 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.65□□□□□ -0.38
Tpm1P58771 Gm29396-201ENSMUST00000185659 716 ntBASIC12.65□□□□□ -0.38
Tpm1P58771 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.65□□□□□ -0.38
Tpm1P58771 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tpm1P58771 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tpm1P58771 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tpm1P58771 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Tpm1P58771 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.65□□□□□ -0.39
Tpm1P58771 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tpm1P58771 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Tpm1P58771 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tpm1P58771 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Tpm1P58771 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Tpm1P58771 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tpm1P58771 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Tpm1P58771 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tpm1P58771 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tpm1P58771 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.64□□□□□ -0.39
Tpm1P58771 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tpm1P58771 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms