Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Msh6P54276 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.36□□□□□ -0.11
Msh6P54276 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Gm44106-201ENSMUST00000203153 1599 ntBASIC14.36□□□□□ -0.11
Msh6P54276 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Msh6P54276 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Msh6P54276 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Msh6P54276 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.36□□□□□ -0.11
Msh6P54276 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Msh6P54276 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Msh6P54276 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.35□□□□□ -0.11
Msh6P54276 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Msh6P54276 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Msh6P54276 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Msh6P54276 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Msh6P54276 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Msh6P54276 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Gm37782-201ENSMUST00000194879 678 ntBASIC14.35□□□□□ -0.11
Msh6P54276 Gm43969-201ENSMUST00000204833 535 ntBASIC14.35□□□□□ -0.11
Msh6P54276 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC14.35□□□□□ -0.11
Msh6P54276 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.35□□□□□ -0.11
Msh6P54276 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Gm14005-210ENSMUST00000225087 1413 ntBASIC14.35□□□□□ -0.11
Msh6P54276 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Msh6P54276 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Msh6P54276 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Msh6P54276 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.35□□□□□ -0.11
Msh6P54276 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Msh6P54276 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msh6P54276 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.35□□□□□ -0.11
Msh6P54276 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Msh6P54276 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Msh6P54276 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Msh6P54276 Snord23-201ENSMUST00000116828 109 ntBASIC14.34□□□□□ -0.11
Msh6P54276 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Gm26368-201ENSMUST00000157826 118 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.34□□□□□ -0.11
Msh6P54276 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Msh6P54276 Gm43854-201ENSMUST00000200418 394 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC14.34□□□□□ -0.11
Msh6P54276 Gm44814-201ENSMUST00000207018 434 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Gm4903-201ENSMUST00000210462 405 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Gm9102-201ENSMUST00000219250 465 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Gm5449-201ENSMUST00000081132 357 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.34□□□□□ -0.11
Msh6P54276 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Msh6P54276 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Msh6P54276 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Msh6P54276 Gm44153-201ENSMUST00000204162 1580 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Msh6P54276 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Msh6P54276 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msh6P54276 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC14.34□□□□□ -0.11
Msh6P54276 Gm27956-201ENSMUST00000175604 260 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms