Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.36□□□□□ -0.59
Atxn1P54254 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.36□□□□□ -0.59
Atxn1P54254 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.36□□□□□ -0.59
Atxn1P54254 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Gm15615-201ENSMUST00000118876 198 ntBASIC11.36□□□□□ -0.59
Atxn1P54254 Gm12274-201ENSMUST00000120062 385 ntBASIC11.36□□□□□ -0.59
Atxn1P54254 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.36□□□□□ -0.59
Atxn1P54254 Gm6644-201ENSMUST00000186507 951 ntBASIC11.36□□□□□ -0.59
Atxn1P54254 Gm37782-201ENSMUST00000194879 678 ntBASIC11.36□□□□□ -0.59
Atxn1P54254 Gm43380-201ENSMUST00000200421 220 ntBASIC11.36□□□□□ -0.59
Atxn1P54254 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.36□□□□□ -0.59
Atxn1P54254 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Atxn1P54254 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.35□□□□□ -0.59
Atxn1P54254 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Atxn1P54254 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Atxn1P54254 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.35□□□□□ -0.59
Atxn1P54254 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Atxn1P54254 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Atxn1P54254 Gm11500-201ENSMUST00000118237 601 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm12663-201ENSMUST00000118481 958 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm13204-201ENSMUST00000120110 821 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm13445-201ENSMUST00000121664 307 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.35□□□□□ -0.59
Atxn1P54254 Gm24954-201ENSMUST00000178831 110 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Atxn1P54254 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm38151-201ENSMUST00000195085 289 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm42430-201ENSMUST00000197209 616 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm43671-201ENSMUST00000200422 433 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.35□□□□□ -0.59
Atxn1P54254 Gm30671-201ENSMUST00000214898 318 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.35□□□□□ -0.59
Atxn1P54254 AC105408.1-201ENSMUST00000227771 802 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Atxn1P54254 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Atxn1P54254 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Atxn1P54254 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.35□□□□□ -0.59
Atxn1P54254 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Atxn1P54254 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms