Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Lbx1P52955 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lbx1P52955 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lbx1P52955 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.08□□□□□ -0.64
Lbx1P52955 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Gm16547-201ENSMUST00000159474 293 ntBASIC11.08□□□□□ -0.64
Lbx1P52955 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.08□□□□□ -0.64
Lbx1P52955 Gm18466-201ENSMUST00000209147 499 ntBASIC11.08□□□□□ -0.64
Lbx1P52955 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.08□□□□□ -0.64
Lbx1P52955 Gm5178-201ENSMUST00000219380 898 ntBASIC11.08□□□□□ -0.64
Lbx1P52955 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC11.08□□□□□ -0.64
Lbx1P52955 AC163638.2-201ENSMUST00000224920 827 ntBASIC11.08□□□□□ -0.64
Lbx1P52955 Bpifa5-201ENSMUST00000028986 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Lbx1P52955 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lbx1P52955 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.07□□□□□ -0.64
Lbx1P52955 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Lbx1P52955 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Lbx1P52955 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm12028-201ENSMUST00000118065 436 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.07□□□□□ -0.64
Lbx1P52955 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm15664-201ENSMUST00000160167 184 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm10807-201ENSMUST00000177134 795 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Gm6291-201ENSMUST00000179994 309 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Mir7051-201ENSMUST00000184167 73 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm37597-201ENSMUST00000191853 382 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm22341-201ENSMUST00000083775 129 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lbx1P52955 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.07□□□□□ -0.64
Lbx1P52955 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.07□□□□□ -0.64
Lbx1P52955 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lbx1P52955 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lbx1P52955 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lbx1P52955 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lbx1P52955 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lbx1P52955 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms