Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mir1901-201ENSMUST00000122616 78 ntBASIC12.02□□□□□ -0.49
Shmt1P50431 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.02□□□□□ -0.49
Shmt1P50431 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Shmt1P50431 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Mir6998-201ENSMUST00000183343 64 ntBASIC12.02□□□□□ -0.49
Shmt1P50431 Gm37284-201ENSMUST00000193607 539 ntBASIC12.02□□□□□ -0.49
Shmt1P50431 Gm43163-201ENSMUST00000196571 442 ntBASIC12.02□□□□□ -0.49
Shmt1P50431 Gm9353-201ENSMUST00000200472 604 ntBASIC12.02□□□□□ -0.49
Shmt1P50431 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.02□□□□□ -0.49
Shmt1P50431 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Shmt1P50431 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.02□□□□□ -0.49
Shmt1P50431 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.02□□□□□ -0.49
Shmt1P50431 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.02□□□□□ -0.49
Shmt1P50431 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Gm10263-201ENSMUST00000085163 300 ntBASIC12.02□□□□□ -0.49
Shmt1P50431 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shmt1P50431 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Shmt1P50431 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.02□□□□□ -0.49
Shmt1P50431 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt1P50431 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Shmt1P50431 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.02□□□□□ -0.49
Shmt1P50431 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shmt1P50431 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.01□□□□□ -0.49
Shmt1P50431 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Shmt1P50431 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Shmt1P50431 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Shmt1P50431 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm26013-201ENSMUST00000104404 119 ntBASIC12.01□□□□□ -0.49
Shmt1P50431 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Shmt1P50431 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm8492-201ENSMUST00000182375 987 ntBASIC12.01□□□□□ -0.49
Shmt1P50431 Gm8531-201ENSMUST00000188319 893 ntBASIC12.01□□□□□ -0.49
Shmt1P50431 Gm17877-201ENSMUST00000192578 814 ntBASIC12.01□□□□□ -0.49
Shmt1P50431 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.01□□□□□ -0.49
Shmt1P50431 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.01□□□□□ -0.49
Shmt1P50431 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shmt1P50431 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.01□□□□□ -0.49
Shmt1P50431 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.01□□□□□ -0.49
Shmt1P50431 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Shmt1P50431 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Shmt1P50431 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.01□□□□□ -0.49
Shmt1P50431 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt1P50431 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shmt1P50431 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Shmt1P50431 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12□□□□□ -0.49
Shmt1P50431 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12□□□□□ -0.49
Shmt1P50431 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12□□□□□ -0.49
Shmt1P50431 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Gm8197-202ENSMUST00000193422 934 ntBASIC12□□□□□ -0.49
Shmt1P50431 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12□□□□□ -0.49
Shmt1P50431 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12□□□□□ -0.49
Shmt1P50431 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12□□□□□ -0.49
Shmt1P50431 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12□□□□□ -0.49
Shmt1P50431 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms