Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
GdnfP48540 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.05□□□□□ -0.8
GdnfP48540 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
GdnfP48540 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
GdnfP48540 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.05□□□□□ -0.8
GdnfP48540 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
GdnfP48540 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.04□□□□□ -0.8
GdnfP48540 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
GdnfP48540 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC10.04□□□□□ -0.8
GdnfP48540 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
GdnfP48540 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.04□□□□□ -0.8
GdnfP48540 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
GdnfP48540 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.04□□□□□ -0.8
GdnfP48540 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.04□□□□□ -0.8
GdnfP48540 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.04□□□□□ -0.8
GdnfP48540 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.04□□□□□ -0.8
GdnfP48540 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Gm25700-201ENSMUST00000177693 110 ntBASIC10.04□□□□□ -0.8
GdnfP48540 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
GdnfP48540 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
GdnfP48540 Gm9230-201ENSMUST00000188228 532 ntBASIC10.04□□□□□ -0.8
GdnfP48540 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.04□□□□□ -0.8
GdnfP48540 Gm40332-201ENSMUST00000199847 938 ntBASIC10.04□□□□□ -0.8
GdnfP48540 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.04□□□□□ -0.8
GdnfP48540 Gm17931-201ENSMUST00000208132 634 ntBASIC10.04□□□□□ -0.8
GdnfP48540 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
GdnfP48540 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
GdnfP48540 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
GdnfP48540 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
GdnfP48540 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
GdnfP48540 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.03□□□□□ -0.8
GdnfP48540 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
GdnfP48540 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
GdnfP48540 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
GdnfP48540 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
GdnfP48540 Erich3-203ENSMUST00000189969 3460 ntBASIC10.03□□□□□ -0.8
GdnfP48540 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms