Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm5257-201ENSMUST00000121823 790 ntBASIC13.03□□□□□ -0.32
Vcam1P29533 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Gm5529-201ENSMUST00000165691 891 ntBASIC13.03□□□□□ -0.32
Vcam1P29533 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.03□□□□□ -0.32
Vcam1P29533 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC13.03□□□□□ -0.32
Vcam1P29533 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.03□□□□□ -0.32
Vcam1P29533 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vcam1P29533 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.03□□□□□ -0.32
Vcam1P29533 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vcam1P29533 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.03□□□□□ -0.32
Vcam1P29533 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.03□□□□□ -0.32
Vcam1P29533 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vcam1P29533 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Vcam1P29533 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcam1P29533 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vcam1P29533 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Vcam1P29533 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcam1P29533 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcam1P29533 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcam1P29533 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcam1P29533 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcam1P29533 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.02□□□□□ -0.32
Vcam1P29533 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vcam1P29533 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Vcam1P29533 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vcam1P29533 Gm14993-201ENSMUST00000121180 164 ntBASIC13.02□□□□□ -0.33
Vcam1P29533 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.02□□□□□ -0.33
Vcam1P29533 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Gm20781-201ENSMUST00000193154 693 ntBASIC13.02□□□□□ -0.33
Vcam1P29533 Gm21736-201ENSMUST00000195399 693 ntBASIC13.02□□□□□ -0.33
Vcam1P29533 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.02□□□□□ -0.33
Vcam1P29533 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.02□□□□□ -0.33
Vcam1P29533 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.02□□□□□ -0.33
Vcam1P29533 Gm5178-201ENSMUST00000219380 898 ntBASIC13.02□□□□□ -0.33
Vcam1P29533 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.02□□□□□ -0.33
Vcam1P29533 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vcam1P29533 Gm7589-201ENSMUST00000085631 534 ntBASIC13.02□□□□□ -0.33
Vcam1P29533 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.02□□□□□ -0.33
Vcam1P29533 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vcam1P29533 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vcam1P29533 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vcam1P29533 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Vcam1P29533 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.01□□□□□ -0.33
Vcam1P29533 Gm12453-201ENSMUST00000121981 331 ntBASIC13.01□□□□□ -0.33
Vcam1P29533 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Gm20392-201ENSMUST00000173047 701 ntBASIC13.01□□□□□ -0.33
Vcam1P29533 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.01□□□□□ -0.33
Vcam1P29533 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.01□□□□□ -0.33
Vcam1P29533 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.01□□□□□ -0.33
Vcam1P29533 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Vcam1P29533 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Gm42499-201ENSMUST00000196193 1412 ntBASIC13.01□□□□□ -0.33
Vcam1P29533 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vcam1P29533 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms