Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm5453-201ENSMUST00000080866 447 ntBASIC11.83□□□□□ -0.52
Hoxd8P23463 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hoxd8P23463 Gm7589-201ENSMUST00000085631 534 ntBASIC11.83□□□□□ -0.52
Hoxd8P23463 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hoxd8P23463 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxd8P23463 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.83□□□□□ -0.52
Hoxd8P23463 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxd8P23463 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxd8P23463 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.83□□□□□ -0.52
Hoxd8P23463 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxd8P23463 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxd8P23463 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hoxd8P23463 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxd8P23463 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.83□□□□□ -0.52
Hoxd8P23463 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxd8P23463 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxd8P23463 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.83□□□□□ -0.52
Hoxd8P23463 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxd8P23463 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.82□□□□□ -0.52
Hoxd8P23463 Gm14993-201ENSMUST00000121180 164 ntBASIC11.82□□□□□ -0.52
Hoxd8P23463 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Hoxd8P23463 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Gm43124-201ENSMUST00000201878 278 ntBASIC11.82□□□□□ -0.52
Hoxd8P23463 Gm18035-201ENSMUST00000211962 589 ntBASIC11.82□□□□□ -0.52
Hoxd8P23463 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC11.82□□□□□ -0.52
Hoxd8P23463 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Gm10020-201ENSMUST00000081993 612 ntBASIC11.82□□□□□ -0.52
Hoxd8P23463 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxd8P23463 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hoxd8P23463 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Hoxd8P23463 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Snord17-201ENSMUST00000104526 238 ntBASIC11.81□□□□□ -0.52
Hoxd8P23463 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.81□□□□□ -0.52
Hoxd8P23463 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hoxd8P23463 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Gm15003-201ENSMUST00000118884 446 ntBASIC11.81□□□□□ -0.52
Hoxd8P23463 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.81□□□□□ -0.52
Hoxd8P23463 Gm25318-201ENSMUST00000122554 314 ntBASIC11.81□□□□□ -0.52
Hoxd8P23463 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.81□□□□□ -0.52
Hoxd8P23463 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.81□□□□□ -0.52
Hoxd8P23463 Gm16165-201ENSMUST00000160140 795 ntBASIC11.81□□□□□ -0.52
Hoxd8P23463 Gm18201-201ENSMUST00000174735 875 ntBASIC11.81□□□□□ -0.52
Hoxd8P23463 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.81□□□□□ -0.52
Hoxd8P23463 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.81□□□□□ -0.52
Hoxd8P23463 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Gm44647-201ENSMUST00000207402 428 ntBASIC11.81□□□□□ -0.52
Hoxd8P23463 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Gm45500-201ENSMUST00000211676 803 ntBASIC11.81□□□□□ -0.52
Hoxd8P23463 Capsl-202ENSMUST00000226688 739 ntBASIC11.81□□□□□ -0.52
Hoxd8P23463 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxd8P23463 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms