Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.7□□□□□ -0.7
Krt1P04104 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.7□□□□□ -0.7
Krt1P04104 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.7□□□□□ -0.7
Krt1P04104 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Gm11591-201ENSMUST00000120063 702 ntBASIC10.7□□□□□ -0.7
Krt1P04104 Gm11918-201ENSMUST00000121660 179 ntBASIC10.7□□□□□ -0.7
Krt1P04104 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Gm27486-201ENSMUST00000184923 80 ntBASIC10.7□□□□□ -0.7
Krt1P04104 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.7□□□□□ -0.7
Krt1P04104 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Krt1P04104 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.7□□□□□ -0.7
Krt1P04104 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Krt1P04104 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Krt1P04104 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.69□□□□□ -0.7
Krt1P04104 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Krt1P04104 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.69□□□□□ -0.7
Krt1P04104 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Krt1P04104 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.69□□□□□ -0.7
Krt1P04104 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.69□□□□□ -0.7
Krt1P04104 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.69□□□□□ -0.7
Krt1P04104 Gm24548-201ENSMUST00000158650 108 ntBASIC10.69□□□□□ -0.7
Krt1P04104 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Gm3890-201ENSMUST00000182416 207 ntBASIC10.69□□□□□ -0.7
Krt1P04104 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.69□□□□□ -0.7
Krt1P04104 Gm8515-201ENSMUST00000194852 576 ntBASIC10.69□□□□□ -0.7
Krt1P04104 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Krt1P04104 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.69□□□□□ -0.7
Krt1P04104 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.69□□□□□ -0.7
Krt1P04104 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.69□□□□□ -0.7
Krt1P04104 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.69□□□□□ -0.7
Krt1P04104 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.69□□□□□ -0.7
Krt1P04104 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.69□□□□□ -0.7
Krt1P04104 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Krt1P04104 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Krt1P04104 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Krt1P04104 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.69□□□□□ -0.7
Krt1P04104 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.69□□□□□ -0.7
Krt1P04104 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Krt1P04104 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Krt1P04104 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Krt1P04104 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Krt1P04104 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Krt1P04104 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.68□□□□□ -0.7
Krt1P04104 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms