Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Gm20495-201ENSMUST00000173902 235 ntBASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Gm9797-202ENSMUST00000218003 294 ntBASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh1F7BJK1 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm22133-201ENSMUST00000102082 109 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm20482-202ENSMUST00000174729 825 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Mir8109-201ENSMUST00000184375 117 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm38341-201ENSMUST00000195357 515 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm43179-201ENSMUST00000198797 275 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Gm45331-201ENSMUST00000209868 554 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.24□□□□□ -0.77
Pcdh1F7BJK1 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms