Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc149F6V035 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc149F6V035 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc149F6V035 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm15528-201ENSMUST00000117821 864 ntBASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm15374-201ENSMUST00000119313 844 ntBASIC11.59□□□□□ -0.55
Ccdc149F6V035 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm25554-201ENSMUST00000158075 113 ntBASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm3329-201ENSMUST00000159873 556 ntBASIC11.59□□□□□ -0.55
Ccdc149F6V035 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm8197-202ENSMUST00000193422 934 ntBASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm43966-201ENSMUST00000203301 612 ntBASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.59□□□□□ -0.55
Ccdc149F6V035 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.59□□□□□ -0.55
Ccdc149F6V035 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccdc149F6V035 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc149F6V035 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Ccdc149F6V035 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm11340-201ENSMUST00000119226 412 ntBASIC11.58□□□□□ -0.56
Ccdc149F6V035 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm24992-201ENSMUST00000157412 130 ntBASIC11.58□□□□□ -0.56
Ccdc149F6V035 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.58□□□□□ -0.56
Ccdc149F6V035 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.58□□□□□ -0.56
Ccdc149F6V035 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.58□□□□□ -0.56
Ccdc149F6V035 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.58□□□□□ -0.56
Ccdc149F6V035 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc149F6V035 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms