Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm11573-201ENSMUST00000119956 394 ntBASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm15703-201ENSMUST00000120250 880 ntBASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Lect2-202ENSMUST00000225183 823 ntBASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Hdac7-203ENSMUST00000116408 4226 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm44189-201ENSMUST00000204387 3083 ntBASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Sez6l2-203ENSMUST00000106335 3732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 D930048N14Rik-201ENSMUST00000064493 3426 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm5182-201ENSMUST00000217708 6092 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Smoc1-201ENSMUST00000021564 3439 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Tcf7l2-208ENSMUST00000111654 3059 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm14372-201ENSMUST00000125355 2193 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm45746-201ENSMUST00000212623 2447 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm2810-201ENSMUST00000118681 990 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm12485-201ENSMUST00000119641 291 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm14704-201ENSMUST00000120300 874 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm12539-201ENSMUST00000121549 1098 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm5863-201ENSMUST00000121760 1008 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Mir1896-201ENSMUST00000122641 81 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm5637-201ENSMUST00000153890 1119 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm9719-201ENSMUST00000162765 543 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Rpph1-201ENSMUST00000175096 319 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm38314-201ENSMUST00000195709 625 ntBASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC5.41□□□□□ -1.54
Gm3880A0A1B0GSB3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms