Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Gm4310-201ENSMUST00000177847 889 ntBASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Gzmn-202ENSMUST00000225535 989 ntBASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Upk1bQ9Z2C6 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.52□□□□□ -0.72
Upk1bQ9Z2C6 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Upk1bQ9Z2C6 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Upk1bQ9Z2C6 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Upk1bQ9Z2C6 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.52□□□□□ -0.72
Upk1bQ9Z2C6 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Upk1bQ9Z2C6 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Upk1bQ9Z2C6 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Upk1bQ9Z2C6 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Gm11930-201ENSMUST00000117788 190 ntBASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Gm26047-201ENSMUST00000157308 113 ntBASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Gm37597-201ENSMUST00000191853 382 ntBASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Gm26047-202ENSMUST00000198840 115 ntBASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Upk1bQ9Z2C6 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm23270-201ENSMUST00000104055 131 ntBASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm10608-202ENSMUST00000213924 676 ntBASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Gm19309-201ENSMUST00000218295 205 ntBASIC10.51□□□□□ -0.73
Upk1bQ9Z2C6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms