Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm23251-201ENSMUST00000103773 110 ntBASIC11.84□□□□□ -0.51
Cpne8Q9DC53 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm12247-201ENSMUST00000117585 670 ntBASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm12407-201ENSMUST00000180219 324 ntBASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm9555-201ENSMUST00000200908 583 ntBASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.84□□□□□ -0.51
Cpne8Q9DC53 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Ntng1-201ENSMUST00000051253 327 ntBASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cpne8Q9DC53 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cpne8Q9DC53 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cpne8Q9DC53 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cpne8Q9DC53 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cpne8Q9DC53 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cpne8Q9DC53 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cpne8Q9DC53 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cpne8Q9DC53 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm22711-201ENSMUST00000116890 133 ntBASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm7857-201ENSMUST00000117957 358 ntBASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm23085-201ENSMUST00000157849 293 ntBASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm37835-201ENSMUST00000193305 361 ntBASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm7848-201ENSMUST00000210739 718 ntBASIC11.83□□□□□ -0.52
Cpne8Q9DC53 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cpne8Q9DC53 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms