Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Stag1Q9D3E6 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.6□□□□□ -0.23
Stag1Q9D3E6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Stag1Q9D3E6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm15197-201ENSMUST00000120526 478 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm8723-201ENSMUST00000166076 820 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm8701-201ENSMUST00000169259 874 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm9081-201ENSMUST00000182346 991 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm28833-201ENSMUST00000189671 559 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm44323-201ENSMUST00000198689 129 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm43671-201ENSMUST00000200422 433 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm5599-201ENSMUST00000209602 788 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Stag1Q9D3E6 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.58□□□□□ -0.23
Stag1Q9D3E6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Stag1Q9D3E6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Stag1Q9D3E6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Stag1Q9D3E6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Stag1Q9D3E6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm25053-201ENSMUST00000103982 133 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm25922-201ENSMUST00000104281 130 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm24679-201ENSMUST00000158762 111 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Olfml3-204ENSMUST00000169286 874 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm19587-201ENSMUST00000191395 545 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm25053-202ENSMUST00000199731 132 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Stag1Q9D3E6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Stag1Q9D3E6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms