Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Gm22119-201ENSMUST00000175594 99 ntBASIC12□□□□□ -0.49
Ddx56Q9D0R4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Gm10774-201ENSMUST00000188689 204 ntBASIC12□□□□□ -0.49
Ddx56Q9D0R4 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12□□□□□ -0.49
Ddx56Q9D0R4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12□□□□□ -0.49
Ddx56Q9D0R4 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12□□□□□ -0.49
Ddx56Q9D0R4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ddx56Q9D0R4 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm7741-201ENSMUST00000181445 989 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm6439-201ENSMUST00000199849 862 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ddx56Q9D0R4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ddx56Q9D0R4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ddx56Q9D0R4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ddx56Q9D0R4 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.98□□□□□ -0.49
Ddx56Q9D0R4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ddx56Q9D0R4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ddx56Q9D0R4 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ddx56Q9D0R4 Gm43014-201ENSMUST00000198568 2443 ntBASIC11.98□□□□□ -0.49
Ddx56Q9D0R4 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ddx56Q9D0R4 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms