Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.55□□□□□ -0.72
Trim13Q9CYB0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Gm9823-201ENSMUST00000051212 327 ntBASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.55□□□□□ -0.72
Trim13Q9CYB0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trim13Q9CYB0 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gm7399-201ENSMUST00000032395 858 ntBASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trim13Q9CYB0 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Spata33-207ENSMUST00000212760 4074 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm12015-201ENSMUST00000117065 843 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm15626-201ENSMUST00000117478 868 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm11511-201ENSMUST00000118146 540 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm13297-201ENSMUST00000120205 934 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm11793-201ENSMUST00000120433 981 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm6439-201ENSMUST00000199849 862 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm8956-201ENSMUST00000203939 825 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm4607-201ENSMUST00000206649 577 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms