Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Gm14071-201ENSMUST00000117817 509 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Gm5616-201ENSMUST00000165252 384 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Gm8741-201ENSMUST00000174736 384 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Gm28071-201ENSMUST00000190355 478 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Gm43758-201ENSMUST00000199500 367 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 BC043934-202ENSMUST00000185694 2356 ntBASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkd1Q99MH6 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm11509-201ENSMUST00000117358 325 ntBASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkd1Q99MH6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms