Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm23675-201ENSMUST00000157311 125 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm25226-201ENSMUST00000158198 123 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm43547-201ENSMUST00000197729 328 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm45574-201ENSMUST00000210921 331 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm15196-201ENSMUST00000121406 482 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm14441-201ENSMUST00000121960 540 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm26272-201ENSMUST00000179241 132 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm26976-201ENSMUST00000182929 908 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm42660-201ENSMUST00000197733 947 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm43084-201ENSMUST00000200696 947 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm9487-201ENSMUST00000216600 472 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm8255-201ENSMUST00000218693 305 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Capsl-202ENSMUST00000226688 739 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx6-1Q99MA9 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Gm45251-201ENSMUST00000209486 1465 ntBASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nkx6-1Q99MA9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms