Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm12857-201ENSMUST00000117678 592 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm12196-201ENSMUST00000120954 262 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm7003-201ENSMUST00000195089 312 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm18753-201ENSMUST00000201000 566 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm10288-201ENSMUST00000084614 537 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm12217-201ENSMUST00000118858 696 ntBASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm17040-202ENSMUST00000170597 889 ntBASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm4310-201ENSMUST00000177847 889 ntBASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm43138-201ENSMUST00000199123 708 ntBASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm6450-201ENSMUST00000200896 574 ntBASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Chmp1b1Q99LU0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Gm7857-201ENSMUST00000117957 358 ntBASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Gm4909-201ENSMUST00000118749 794 ntBASIC10.78□□□□□ -0.68
Chmp1b1Q99LU0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms