Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.02□□□□□ -0.49
Usp11Q99K46 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.02□□□□□ -0.49
Usp11Q99K46 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Usp11Q99K46 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usp11Q99K46 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Usp11Q99K46 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Usp11Q99K46 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm11663-201ENSMUST00000117888 290 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm4310-201ENSMUST00000177847 889 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Usp11Q99K46 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm6114-201ENSMUST00000182472 968 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm8100-201ENSMUST00000182906 988 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm2965-201ENSMUST00000198365 343 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm7848-201ENSMUST00000210739 718 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Usp11Q99K46 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp11Q99K46 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.01□□□□□ -0.49
Usp11Q99K46 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Usp11Q99K46 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Usp11Q99K46 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Usp11Q99K46 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
Usp11Q99K46 Gm13035-201ENSMUST00000117496 342 ntBASIC12□□□□□ -0.49
Usp11Q99K46 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12□□□□□ -0.49
Usp11Q99K46 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12□□□□□ -0.49
Usp11Q99K46 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Mir5120-201ENSMUST00000175020 78 ntBASIC12□□□□□ -0.49
Usp11Q99K46 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
Usp11Q99K46 Gm4482-201ENSMUST00000200876 742 ntBASIC12□□□□□ -0.49
Usp11Q99K46 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Usp11Q99K46 AC155637.1-201ENSMUST00000218560 636 ntBASIC12□□□□□ -0.49
Usp11Q99K46 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp11Q99K46 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms