Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Gm43138-201ENSMUST00000199123 708 ntBASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Gm6722-201ENSMUST00000221586 390 ntBASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim29Q8R2Q0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Gm4909-201ENSMUST00000118749 794 ntBASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Gm37246-201ENSMUST00000192665 835 ntBASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Gm44506-201ENSMUST00000206278 965 ntBASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Nsd1-205ENSMUST00000224693 852 ntBASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim29Q8R2Q0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13□□□□□ -0.33
Trim29Q8R2Q0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Mir680-2-201ENSMUST00000102163 110 ntBASIC13□□□□□ -0.33
Trim29Q8R2Q0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Gm23251-201ENSMUST00000103773 110 ntBASIC13□□□□□ -0.33
Trim29Q8R2Q0 Gm15595-201ENSMUST00000120840 961 ntBASIC13□□□□□ -0.33
Trim29Q8R2Q0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Gm9445-201ENSMUST00000207454 1285 ntBASIC13□□□□□ -0.33
Trim29Q8R2Q0 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim29Q8R2Q0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim29Q8R2Q0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim29Q8R2Q0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim29Q8R2Q0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim29Q8R2Q0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim29Q8R2Q0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms