Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.59□□□□□ -0.71
H2afjQ8R1M2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afjQ8R1M2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.71
H2afjQ8R1M2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
H2afjQ8R1M2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 AY036118-201ENSMUST00000200021 923 ntBASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
H2afjQ8R1M2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm25890-201ENSMUST00000177643 165 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm22614-201ENSMUST00000178300 165 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm8343-201ENSMUST00000182705 994 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Mir7677-201ENSMUST00000184226 67 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm28071-201ENSMUST00000190355 478 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm6450-201ENSMUST00000200896 574 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm45331-201ENSMUST00000209868 554 ntBASIC10.57□□□□□ -0.72
H2afjQ8R1M2 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms