Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm15547-201ENSMUST00000122152 333 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm26047-201ENSMUST00000157308 113 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Mir8093-201ENSMUST00000185043 137 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm5370-201ENSMUST00000187187 574 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm38158-201ENSMUST00000194617 339 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm26047-202ENSMUST00000198840 115 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm8712-201ENSMUST00000221090 701 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm5455-201ENSMUST00000058710 715 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cnot3Q8K0V4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Gm17150-201ENSMUST00000165577 381 ntBASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Gm5982-201ENSMUST00000196234 512 ntBASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Gm43133-201ENSMUST00000197472 463 ntBASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cnot3Q8K0V4 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms