Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Gm13226-201ENSMUST00000117838 404 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Gm12463-201ENSMUST00000118271 849 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Gm11660-201ENSMUST00000120955 412 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Mir1896-201ENSMUST00000122641 81 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Gm43133-201ENSMUST00000197472 463 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Morn2-202ENSMUST00000227729 656 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc28bQ8CEG5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm5370-201ENSMUST00000187187 574 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm2553-201ENSMUST00000215986 605 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm8712-201ENSMUST00000221090 701 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc28bQ8CEG5 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc28bQ8CEG5 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms