Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim52Q8CDV4 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim52Q8CDV4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim52Q8CDV4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim52Q8CDV4 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Trim52Q8CDV4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim52Q8CDV4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim52Q8CDV4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim52Q8CDV4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim52Q8CDV4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trim52Q8CDV4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm11354-201ENSMUST00000121974 422 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm9372-201ENSMUST00000168454 430 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm20392-201ENSMUST00000173047 701 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm20781-201ENSMUST00000193154 693 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm21736-201ENSMUST00000195399 693 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm4903-201ENSMUST00000210462 405 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Gm8420-201ENSMUST00000097103 598 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Trim52Q8CDV4 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gm13019-201ENSMUST00000120000 276 ntBASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gm13981-201ENSMUST00000122360 447 ntBASIC13.98□□□□□ -0.17
Trim52Q8CDV4 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gm15620-201ENSMUST00000122949 270 ntBASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gm5621-201ENSMUST00000187303 640 ntBASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.98□□□□□ -0.17
Trim52Q8CDV4 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.97□□□□□ -0.17
Trim52Q8CDV4 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim52Q8CDV4 Gm11979-201ENSMUST00000119629 743 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms